KGGSEE doc
- 1 Introduction
- 2 Installation
- 3 Tutorials
- 4 Functions
- 4.1 Gene-based association analysis by an effective chi-square statistics(ECS)
- 4.2 Finely map genes and estimate relevant cell types of a phenotype by the single-cell (or bulk-cell) type and phenotype cross annotation framework(DESE)
- 4.3 Multi-strategy Conditional Gene-based Association framework mainly guided by eQTLs (eDESE)
- 4.4 Infer the causal genes based on GWAS summary statistics and eQTLs by Mendelian randomization analysis framework for causal gene estimation(EMIC)
- 4.5 Compute the gene/isoform-level eQTLs of each tissue
- 5 Options Index